Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKTILLGLVGLSAMTLAACSNGQSSKETTWDNIKKDGVLKVATPATLYPTSYYDDHKKLTGYEIDMMKAIAKKLKIKVKFVEVGVAESFTSVDSGKVDVAVNNFDTTPERLKKYNFSQPYKYSVGGMIVRADGSSKITAKDLSDWKGKKAGGGAGTQYMKIAKQQGAEPVIYDNVTNDVYLRDVSTGRTDFIPNDYYTQVIAVKYVTKQYPDIKVKMGDVKYNPTEQGIVMSKKDKSLKTKIDAAIKDMKKDGSLKKISEKYYAGQDLTKEPAGTDKIPVIKVK |
| 3VVD Chain:A ((21-257)) | ----------------------GSEFQVRSFEEIKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFTNPH-YCTGGVIVSRKGGPR-TAKDL---QGKVVGVQVGTTYMEAAQKIPGIKEVRTYQRDPDALQDLLAGRIDTWITDRF---VAKEAIKERKLENTLQVGELVFQ-ERVAMAVAKGNKSLLDALNRALAELMQDGTYARISQKWF-GEDVRCK------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21598 for 2006 contacts (-10.8/contact) +
2D Compatibility (PS) -25485 + (NN) -9373 + (LL) 3172
1D Compatibility (HY) -12400 + (ID) 3200
Total energy: -68884.0 ( -34.34 by residue)
QMean score : 0.398
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