Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIFDKSMKLEHVAYDIRGPVLEEADRMRANGEKILRLNTGNPAAFGFEAPDEVIRDLITNARESEG-YSDSKGIFSARKAVMQYYQLQN-IHVDMDDIYIVNGVSEGISMSMQALLDNDDEVLVPMPDYPLWTACVSLAGGNAVHYICDEEANWYPDIDDIKSKITSKTKAIVLINPNNPTGAVYPREILQEIVDIARQNDLIIFSDEVYDRLVMDGMEHIPIASIAEDIF--TVTLSGLSKSHRICGFRVGWMVLSGPRQHVKGYIEGLNMLANMRLCSNVLAQ-QVIQTSLGGQQSIDSMLLPGGRIYEQRNYIHKAINEIPGLSAVKPNAGLYLFPKI-DTDMYRIDNDEEFVLNFLKQEKVLLTHGRGFNMNTADHFRIVYLPRVDELTELQEKMARFLSQYKR |
| 1J32 Chain:A ((4-384)) | ------AARVESVSPSMTLIIDAKAKAMKAEGIDVCSFSAGEP---DFNTPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGF--LAGPVPLVKAATK-IQGHSTSNVCT--FAQYGAIAAYENSQDCVQEML---AAFAERRRYMLDALNAMPGLECPKPDGAFYMFPSIAKTGRSSLD----FCSELLDQHQVATVPGAAFGAD--DCIRLSYATDLDTIKRGMERLEKFLHGIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J32.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -227394 for 3363 contacts (-67.6/contact) +
2D Compatibility (PS) -41290 + (NN) -17822 + (LL) 1440
1D Compatibility (HY) -21600 + (ID) 5400
Total energy: -312066.0 ( -92.79 by residue)
QMean score : 0.540
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