Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQNIGQTGIQATRIALGCMRMSDLEGKQAEEVVGTALDLGINFFDHADIYG-GGLSELRFRDAIKHLNVNRDKMIIQSKCGIREGYFDFSK-----EYILSSVDGILERLGTEYLDFLILHRPDVLVEPEEVAEAFTKLRAEGKVKHFGVSNQNRFQMELLQSYLDEPLAVNQLQLSPAHTPMFDAGLNVNMLNKASIEHDDGIVDYCRLKRVTIQAWSPFQIDLSRGLF--------VNHPDY--KELNETIAKLAKNYNVSSEAIVIAWILRHPAQIQAIVGSMNPSRLKAIDKANDIALTREEWYDIYRSAGNILP |
| 3UYI Chain:A ((5-305)) | ---KLGTQGLEVSKLGFGCMGLSGLPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLP--REKIQVGTKFGIHEIGFSGVKAKGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGEL-KLVEEGKIKYVGLSEASPDTIR--RAHAVHPVTALQIEYS---------------LWTRDIE--DEIVPLCRQLGIGIVPYSP----IGRGLFAGKAIKES------KNKQIYYRIEALSQKHGCTPVQLALAWVLHQGEDVVPIPGTTKIKNLHNNVGALKVKLTKEDLKEISDAVPLDEV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -134833 for 2122 contacts (-63.5/contact) +
2D Compatibility (PS) -27897 + (NN) -10228 + (LL) 2012
1D Compatibility (HY) -21200 + (ID) 4200
Total energy: -196346.0 ( -92.53 by residue)
QMean score : 0.534
|
|
|