Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTIVMQADKKLQEKIRTDLAQHHISNNNPYVVFSAKISGTTVLLYTSGKLVFQGSNASHIAQKYGYIEQKESCSSETQDIPIIGTDEVGNGSYFGGLAVVASFVTPKDHAYLKKLGVGDSKTLTDQKIKQIAPLLEKAIPHKALLLSPQKYNQVVGPNNKHNAVSVKVALHNQAIFLLLQDGFEPE----KIVIDAFTSSKNYQNYLKNEKNQFKQTITLEEKAENKYLAVAVSSIIARNLFLENLNKLSDDVGYKLPSGAGHQSDKVASQLLKAYGISSLEHCAKLHFANTKKAQALLK |
3VN5 Chain:A ((27-244)) | ---------------------------NAPYTLWALEGNGVKVYYYKTGSLLIQGKNSEKVLKEVLNLLEK-------KKLP--GCDESGKGDIFGSLVLCCVCIPEENYLKVSSLNPRDTKRLSDKRVERLYLALKPLVKAYCYEIKPEEYNKLYRKFRNLN----KMMTH---FYKLLIERVKEECGVSEVVVDKYQPS-----------NPFGEDVIFETEAE-RNLAVAVASIFARYKFLQSLKEVERELGIKIPKGTSKEVKELAKSLKNPERFIKLNFN---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VN5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77257 for 1573 contacts (-49.1/contact) +
2D Compatibility (PS) -23305 + (NN) -10689 + (LL) 5508
1D Compatibility (HY) -19200 + (ID) 3100
Total energy: -128043.0 ( -81.40 by residue)
QMean score : 0.456
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