Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEITWTVKYITEFIATAFLIILGNGAVANVDLKGTKGNNSGWIIIAIGYGLGVMMPALMFGNVSGNHINPAFTLGLAFSGLFPWAHVGQYILAQILGAMFGQLVVVMVYQPYFVKTENPNHVL-GSFSTISALDDGQKSSRKAAYIN---GFLNEFVGSFVLFFGALALTKNYFGVELVGKLVQAGYDQTTAATRISPYVTGSLAVAHLGIGFLVMTLVASLGGPTGPALNPARDLGPRIVHRLLP-KQILGQAKEDSKWWYAWVPVLAPIVASILAVALFKLLYL
1LDI Chain:A ((10-254))--------QCIAEFLGTGLLIFFGVGCVAALKVAGASFGQ--WEISVI-WGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDL--AGTFSTYPNPHINFVQAFAVEMVITAILMGLILALTDDGNGVP-----------------------RGPL--APLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAGWGNVAFTGGRDIP--YFLVPLFGPIVGAIVGAFAYRKLIG


General information:
TITO was launched using:
RESULT:

Template: 1LDI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134659 for 2138 contacts (-63.0/contact) +
2D Compatibility (PS) -24914 + (NN) -6336 + (LL) 3268
1D Compatibility (HY) -24800 + (ID) 4250
Total energy: -191691.0 ( -89.66 by residue)
QMean score : 0.302

(partial model without unconserved sides chains):
PDB file : Tito_1LDI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LDI-query.scw
PDB file : Tito_Scwrl_1LDI.pdb: