Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSYWNNYPELKKNIDETNQLIQERIQVRNKDIEAALSQLTAAGGKQLRPAFFYLFSQLGNKENQDTQQLKKIAASLEILHVATLIHDDVIDDSPLRRGNMTIQSKFGKDIAVYTGDLLFTVFFDLILESMADTPFMRINAKSMRKILMGELDQMHLRYNQQQGIHHYLRAISGKTAELFKLASKEGAYFGGAE--KEVVRL-AGHIGFNIGMTFQILDDILDYTADKKTFNKPVLEDLTQGVYSLPLLLAI-----EENPDIFKPILDKKTDMATEDMEKIAYLVVSHRGVDKARHLARKFTEKAISDINKLPQNSAKKQLLQLTNYLLKRKI |
| 4LOB Chain:A ((43-345)) | ------------------DHLINEGISSKVGLVMSVSKHVVEAGGKRMRPIMCLLAARACDLDNM--QNAQRLAAIIEMLHTATLVHDDVVD--------------WNNQTAVLVGDFLIARAFDLLVD-LNNMTLLKDFSTGTCEIAEGEVLQLQSQHQPDTTEETYLKIIHGKTSRLFELATEGAAILAGQEAYREPLRLFAGH----FGNAFQIIDDILDYTSDAETLGKNIGDDLMEGKPTLPLISALAHSTGEEHAIIRRSIATGGVD----QLPKVIEIVQKSGALDYCQRRAQEETEAALQALSILPDTPYRQALINLTRLALHRI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LOB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116186 for 2302 contacts (-50.5/contact) +
2D Compatibility (PS) -30516 + (NN) -20825 + (LL) 1908
1D Compatibility (HY) -17600 + (ID) 4850
Total energy: -188069.0 ( -81.70 by residue)
QMean score : 0.543
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