Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRSERMVVISNYLINNPYTLTSLNTFASKYGAAKSSISEDIAIIKKAFEQAQIGDIKTVTGASGGVIFTPTIAEAEAKEIVEELRQRLSENDRILPGGYIYLSDLLST---PKMLQSIGRIVANAYRGQKIDAVMTVATKGVPLANAVANVLDVPFVIVRRDLKIT-EGSTVSVNYASGSSGRIEKMFLSKRSLKPNSRVLIVDDFLKGGGTVSGMISLLSEFDSTLVGVAVFAENA-QEQRE---KMAYK--SLLRVSEIDVKNNRVSVEAGNIFD
2FXV Chain:A ((1-182))
-----------------------------------------------------------------------------------MEALKRKIEEEGVVLSDQVLKVDSFLNHQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQIAVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLEEGKVSFVQ-------
General information:
TITO was launched using:
RESULT:
Template:
2FXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -141314 for 1336 contacts (-105.8/contact) +
2D Compatibility (PS) -18621 + (NN) -5875 + (LL) 6744
1D Compatibility (HY) -14400 + (ID) 2100
Total energy: -175566.0 ( -131.41 by residue)
QMean score : 0.541
(partial model without unconserved sides chains):
PDB file :
Tito_2FXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FXV-query.scw
PDB file :
Tito_Scwrl_2FXV.pdb
: