Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRTYQPSKIRRQRKHGFRHRMSTKNGRRVLASRRRKGRKVLSA
2EQQ Chain:A ((12-19))
---------------------MRTPDGRCKPTFYQLIT------
General information:
TITO was launched using:
RESULT:
Template:
2EQQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 570 for 22 contacts (25.9/contact) +
2D Compatibility (PS) -859 + (NN) -559 + (LL) 2152
1D Compatibility (HY) -400 + (ID) 200
Total energy: 704.0 ( 32.00 by residue)
QMean score : 0.902
(partial model without unconserved sides chains):
PDB file :
Tito_2EQQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EQQ-query.scw
PDB file :
Tito_Scwrl_2EQQ.pdb
: