Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITK--KANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEADNKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK |
205L Chain:A ((19-101)) | -------------------------------------------------------------------------------------KDTEGYYTIGIGHLLT----AAKSAAAELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYK-------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 205L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3871 for 402 contacts (9.6/contact) +
2D Compatibility (PS) -7478 + (NN) -1361 + (LL) 10792
1D Compatibility (HY) -1600 + (ID) 1000
Total energy: 3224.0 ( 8.02 by residue)
QMean score : 0.292
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