Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRITIFCGASTGENPVYSEKTVALAQWMAQNKHSLVYGGGKVGLMGVMADTVIANGGYTTGVIPTFLRDREIAHENLSELIIVNNMPERKAKMMLLGDAFIALPGGPGTLEEISEVISWSRIGQNDNPCILYNVNGYFNDLKNMFDHMVGEGFLSLEDRENVLFSDDITEIEDFITNYKVPSTRQY
3SBX Chain:A ((16-182))
--VAVYCAAAP-THPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADELVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAMERLIVVDNLDDALQACAP---------
General information:
TITO was launched using:
RESULT:
Template:
3SBX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -110773 for 1335 contacts (-83.0/contact) +
2D Compatibility (PS) -18880 + (NN) -11109 + (LL) 832
1D Compatibility (HY) -12000 + (ID) 2700
Total energy: -154630.0 ( -115.83 by residue)
QMean score : 0.390
(partial model without unconserved sides chains):
PDB file :
Tito_3SBX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3SBX-query.scw
PDB file :
Tito_Scwrl_3SBX.pdb
: