Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLRRPVLEDKEEILAMYKEFQKESSSVDGGFYEPTMHFEDWLDHNLNMELGVGVPDNFVPYIQFVSFDNDNNAIGFLNLRLRLNDTLLEKGGHIGYSIRPRQRGKGYAKEQLK-LGIEQAHLKNINEILVTCHVDNDASKSVILANGGVLEDCLHQTERYWIT
1S7F Chain:A ((110-180))
----------------------------------------------------------------------------------------INKAAYIGYWLDESFQGQGIMSQSLQALMTHYARRGDIRRFVIKCRVDNQASNAVARRNHFTLEGCMKQAEYLNGD
General information:
TITO was launched using:
RESULT:
Template:
1S7F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9311 for 371 contacts (-25.1/contact) +
2D Compatibility (PS) -7733 + (NN) -4413 + (LL) 5316
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -22091.0 ( -59.54 by residue)
QMean score : 0.451
(partial model without unconserved sides chains):
PDB file :
Tito_1S7F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7F-query.scw
PDB file :
Tito_Scwrl_1S7F.pdb
: