Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIMGLDVGSKTVGVAISD---PLGFTAQGLEIIKIDEESGNFGFDRLAELVKEYKVDKFVVGLPKNMNNTSG-------PRVEASQAYGDKITELFNLPVEYQDERLTTVQAERMLVEQADISRGKRKKVIDKLAAQLILQNYLDRMF
1IV0 Chain:A ((1-97))
MRVGALDVGEARIGLAVGEEGVPLA-SGRGYLVRKTLEED----VEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARG--------VEVELWDERFTTK--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IV0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27855 for 503 contacts (-55.4/contact) +
2D Compatibility (PS) -9620 + (NN) -3783 + (LL) 4404
1D Compatibility (HY) -7200 + (ID) 1750
Total energy: -45804.0 ( -91.06 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_1IV0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IV0-query.scw
PDB file :
Tito_Scwrl_1IV0.pdb
: