Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIYTISSCTSCKKAKTWLNAHQLPYKEQNLGKESLTRDEILEILTKTESGIESIVSSKNRYAKALNC--NIEELSVNEVIDLIQENPRILKSPILIDDKRLQVGYKEDDIRAFLPRSIRNVENAEARLRAAL
2M46 Chain:A ((1-113))
MIKFYQYKNCTTCKKAAKFLDEYGVSYEPIDIVQHTPTINEFKTIIANTGVEINKLFNTHGAKYRELDLKNKLQTLSDDEKLELLSSDGMLVKRPLAVMGDKITLGFKEDQYKETWLA----------------
General information:
TITO was launched using:
RESULT:
Template:
2M46.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52448 for 777 contacts (-67.5/contact) +
2D Compatibility (PS) -11597 + (NN) -1150 + (LL) 1316
1D Compatibility (HY) -10800 + (ID) 1400
Total energy: -76079.0 ( -97.91 by residue)
QMean score : 0.656
(partial model without unconserved sides chains):
PDB file :
Tito_2M46.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2M46-query.scw
PDB file :
Tito_Scwrl_2M46.pdb
: