Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAFADVAKMKKIKEDIKSHEGQMVELTLENGRKREKNKIGRLIEVYPSLFIVEYKDTAAVPGAIDNTYVESYTYSDILTEKTLIRYFDDESAE
1IB8 Chain:A ((96-162))
--------------KDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKT-------RKKTVQIPYSLVSKARLAVKLLE-----
General information:
TITO was launched using:
RESULT:
Template:
1IB8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 496 for 433 contacts (1.1/contact) +
2D Compatibility (PS) -7091 + (NN) -631 + (LL) 1740
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -9236.0 ( -21.33 by residue)
QMean score : 0.145
(partial model without unconserved sides chains):
PDB file :
Tito_1IB8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IB8-query.scw
PDB file :
Tito_Scwrl_1IB8.pdb
: