Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITKEQYFYFRQLDDFK-HFTIEQFDHIVSHIKHRTALKNHTLFFEGDYREKLFLIQSGHVKIEQSDASGSFIYTDYVRQGTVFPYGGLFLD--DDYHFSAVAITDIEYFSLPM-----ALYEEYSLQNINQMKHLCRKYSKLLRVHEIRLRNMVTSSASMRVIQSLATLL--LQVPTERG-HLPFPITTIEIANMSGTTRETVSHVLKELRQKDIVEMKGKKLLYNNKNYFKKFIE
2XHK Chain:A ((12-213))
---------FRELG---LPLQIEQFE------------RGKTIFFPGDPAERVYLLVKGAVKLSRVYESGEEITVALLRENSVFGVLSLLTGQRSDRFYHAVAFTPVQLFSVPIEFMQKALIERPELANV-----MLQGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGIPSPDGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLRESKLIAIHKKRITVFNPVALSQQFS
General information:
TITO was launched using:
RESULT:
Template:
2XHK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103917 for 1317 contacts (-78.9/contact) +
2D Compatibility (PS) -20652 + (NN) -8147 + (LL) 2784
1D Compatibility (HY) -19200 + (ID) 2800
Total energy: -151932.0 ( -115.36 by residue)
QMean score : 0.391
(partial model without unconserved sides chains):
PDB file :
Tito_2XHK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XHK-query.scw
PDB file :
Tito_Scwrl_2XHK.pdb
: