Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKLVSSLLKCSLIIIVSFAGGAFASFVMNHNDNIPNGGVTKTSKVNYNNITPTTKAVKKVQNSVVSVINYKQQESRSDLSDFYSHFFGNQGGNTDKGLQVY-GEGSGVIYKKDGKNAYVVTNNHVIDGAKQIEIQLADGSKAVGKLVGSDTYSDLAVVKI--PSDKVSNIAEFADSSKLNIGETAIAIGSPLGTEYANSVTQGIVSSLKRTVTMTNEEGQTVSTNAIQTDAAINPGNSGGALINIEGQVIGINSSKISSTSNQTSGQSSGNSVEGMGFAIPSNDVVKIINQLESNGQVERPALGISMAGLSNLPSDVISKLKIPSNVTNGIVVASIQSGM-PAQGKLKKYDVITKVDDKEVVSPSDLQSLLYGHQVGDSITVTFYRGENKQTVTIKLTKTSKDLAKQRANN |
| 3STJ Chain:A ((19-334)) | ----------------------------------------------------------LEKVLPAVVSVRVEGT--------------------------QPFEGLGSGVII--NASKGYVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIA-IADSDKLRVGDFAVAVGNPFG--LGQTATSGIVSALGR--SGLNLEGL---ENFIQTDASINRGNSGGALLNLNGELIGINTAILA---------PGGGSV-GIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEMS---ADIAKAFNL--DVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEVTLDTS----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3STJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -116208 for 2520 contacts (-46.1/contact) +
2D Compatibility (PS) -31208 + (NN) -10342 + (LL) 4676
1D Compatibility (HY) -22400 + (ID) 6050
Total energy: -181532.0 ( -72.04 by residue)
QMean score : 0.506
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