Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSFMHSKAVIFSFTMAFFLILAACSGKNEADSKDTGWEQIKDKGKIVVATSGTLYPTSYHDTDSGSDKLTGYEVEVVREAAKRLGLKVEFKEMGIDGMLTAVNSGQVDAAANDIDVTKDREEKFAFSTPYKYSYGTAIVRKDDLSGIKTLKDLKGKKAA---GAATTVYM-EVARKYGAKEVIYDNATNEQYLKDVANGRTDVILNDYYLQTLALAAFPDLNITIHPDIKYMPNKQALVMKKSNAALQKKMNEALKEMSKDGSLTKLSKQFFNKADVSKKIDADVQDVDL
4ZV1 Chain:A ((9-232))-------------------------------------------RGTLRVGTEATFPPFGFKDENG---KLVGFDIDLAKAIAKKLGVKVEFKPMDFDGIIPALQSGKIDVVIAGMTITEERKKQVDFSDPY-FEAGQAIVVKKGNDSIKSLEDLKGKKVGVQLGSTSEQHVKKVAKDAGVKVKKFDNFS--EAFQELKSGRVDAVVTDNAVALAYVKQNPNAGVKIVGET-FSGEPYGIAVRKGNSELLEKINKALEEMKKDGTYDKIYEKWFG-----------------


General information:
TITO was launched using:
RESULT:

Template: 4ZV1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1155 -103403 -89.53 -470.01
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -89.53
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.685

(partial model without unconserved sides chains):
PDB file : Tito_4ZV1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZV1-query.scw
PDB file : Tito_Scwrl_4ZV1.pdb: