Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGENMFKKEKVTEYIWTILIPTIITFIISWVGSYYNGTSTVSIGQPTKVSGQYITPINISPYHDIKELRITFPQKLDVKQISSNEPINVKSDKNNIGVESNSTFEIAKIVENNSVQLLITTQKKLNDKEIRIDKNGNNISVNYESQIVNPAKKQLINLIITSSIYFIMLNILALIMNKRWDKYYAKMKNEIKEFEDNAKDLDKKSKKKSEELSELRKTLNQAFEETDRIKYHEKKKQILLLAKLNDYKKELTF---------WRNTIRKVLYELPDGDKKADKLIGTVTSSLKTYGTVEKNEHDYESLKVAAALLNDSDKRS
4YS0 Chain:A ((691-773))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNWD--IESLKNSLSFFPAGLFDLDEKQFSSSEELHDY--LFNRLWEE-----YQRKKQEI-----GEDYRKVIRFLMLRIIDDHWRRYLEEV----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YS0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 90 -6339 -70.43 -90.55
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -70.43
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_4YS0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YS0-query.scw
PDB file : Tito_Scwrl_4YS0.pdb: