Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTVLILNFPAEGHVNPTLGITKAFSDKGYDVHYISTEKYKKRLEAAGATVHLHRDLLR---TTPIHVGSPNGILDFVKIHIKTSLDILQIVKDLSKSIQFDFVYYD--KFGAGELVRDYLDIPGVSSSASFLFGE-------EHLKILPLHPESGAPLELDQEC---EDLLAKMKETYGVAPKNLVQFMNNKGELNVVYTSRYFQPESDRFGDEC-LFIGPSFPKRAEKTDFPIEQLKDEKVIYISMGTVLDHTEDFFNLCIDAFSGFNG-KVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHGGMNSVNEGIHFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQILKQAVDEVLRNDQYTAGIKKINQSFKECMDMEEVMERIDELIRQKNK
4M83 Chain:A ((10-394))---IAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAATGARPVLYHSTLPGPDADPEAWGS--TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRW-GVPAVSLSPNLVAWKGYEEEVAEPMWREPRQTERGRAYYARFEAWLKENGITEHPDTFASHPPR-----------SLVLIPKALQPHADRVDEDVYTFVGACQGDRAEEGGW-QRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQIGRKVTPAELGELPDNVEVHDWVPQLAILRQADLFVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGLGVARKLATEEATADLLRETALALVDDPEVARRLRRIQAE----MAQEGGTRRAADLI-----


General information:
TITO was launched using:
RESULT:

Template: 4M83.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1931 -206737 -107.06 -561.78
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -107.06
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_4M83.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M83-query.scw
PDB file : Tito_Scwrl_4M83.pdb: