Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRMKVNQMSLLEHIAELRKRLLIVALAFVVFFIAGFFLAKPIIVYLQETDEAKQLTLNAFNLTDPLYVFMQFAFIIGIVLTSPVILYQLWAFVSPGLYEKERKVTLSYIPVSILLFLAGLSFSYYILFPFVVDFMKRISQDLNVNQVIGINEYFHFLLQLTIPFGLLFQMPVILMFLTRLGIVT-PMFLAKIRKYAYFTLL-VIAALITPP-----ELLSHMMVTVPLLILYEISILISKAAYRKAQKSSAADRDVSSGQ
1DAM Chain:A ((138-206))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPVILVVGVKLGCINHAMLTAQVIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWL-----------------------


General information:
TITO was launched using:
RESULT:

Template: 1DAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 191 -56740 -297.07 -915.15
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.49

3D Compatibility (PKB) : -297.07
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_1DAM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DAM-query.scw
PDB file : Tito_Scwrl_1DAM.pdb: