Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTEERKETFEEEINQSERIDADEEPLSRMSRKASRQSKQKQKQKQKPRQERGESTVKDKLASVWAAINRYCGFAFSILKSPAKTVVTDGFSHYKYGLISMLIFSIIFSIGNWFQLKASWNRPLGFGERHHAFYDGFLVVLVYLLIFFAVM---VFAIWAVSRYMMKQKVTFREAAAVLGS------------LLVPVIAVS-ILWLIFAIVNIPMLTVLFTVLILFSIFFIIALYVQRVYQAAQDAPIDYIYCVFAVVAIALLFTAVTWPFISEYITASLIPL
3PV0 Chain:G ((101-237))-----------------------------------------------------------------ALSTTCAYAFARMRFPGKATLLKG----------MLIFQMFPAVLSLVALYALFDR---LGE-----YIPFIGLNTHGGVIFAYLGGIALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLL---------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PV0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 308 -75907 -246.45 -627.33
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain G : 0.62

3D Compatibility (PKB) : -246.45
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.205

(partial model without unconserved sides chains):
PDB file : Tito_3PV0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PV0-query.scw
PDB file : Tito_Scwrl_3PV0.pdb: