Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNEKRLLEEFLELVQIDSETKHEAEICKVL--KRKFSDLGVD-VKEDDTMDITGHGAGNLICTLKGTKQTDT--IYFTSHMDTV--VPGNGVKPVVENGY-------------------------------VKTDGTTILGADDKAGLAAMFEAIKVL-KEENIEHGTIEFIITVGEESGLIGAKALDRSMITASYGYALDSDGKVGNIIVAAPTQAKVRAAIFGKTAHAGVEPEKGISAITIASKAISKMPLGRIDEETTANIGRF---------EGGTQTNIVCDEVHILAEARSLVPEKMEAQVQKMKAAFEEAAADMGGRAEVEIEVMYPGFKYQDGDQVVEIAKKAAAKIGRPSELQTSGGGSDANVIAGHGIPTVNLAVGYEQIHTKNEKMPIEELVKTAEMVVAIIEEAAK
3IFE Chain:A ((26-426))---KEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYLIHNPQIKHGKIRVAFTPDEEIGR-GPAHFDVEAFGASFAYMMDG-GPLGGLEYESFNAAGAKLTFNGTNTHPGTAKNKMRNATKLAMEFNGHLPVEEAPEYTEGYEGFYHLLSLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQE-KYGQDAVVLEMNDQYYNMLEKIEPV------REIVDIAYEAMKSLNIEPNIHPIRGGTDGSQLSYMGLPTPNIFTGGENYHGKFEYVSVDVMEKAVQVIIEI------


General information:
TITO was launched using:
RESULT:

Template: 3IFE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1605 56606 35.27 160.36
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : 35.27
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.409

(partial model without unconserved sides chains):
PDB file : Tito_3IFE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IFE-query.scw
PDB file : Tito_Scwrl_3IFE.pdb: