Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSGNEVHPDLRRIAVVTPRQLVGPRTLPVMRALIVVAGLRMSRTPPDIEVLTLESGVGVRLYRPAGSNEPAPALLWIHAGGYVMGTAQQDDRLCLRFSSRLGITVASVDYRLAPENPYPAALGDCYSALTWLASLPA---VDPARVAIGGASAGGGLAAALALLARDRGGITPAFQLLVYPMLDDRPSIAPA----NPHYRLWNGRANRFGWRAYLGDADARVA---VPGRRDDLGGLAPAWIGVGTHDLLHDEDLAYAERLTAAGVPCQVEVVEGAFHGFDRVAPNVGVSQRFFTSQCNSLRAALALSNRT |
| 1U4N Chain:A ((60-310)) | --------------------------------------------------------LKVRMYRPEGVEPPYPALVYYHGGGWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEHKFPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGYDPAHPPASIEENAEGYLLTGGMSLWFLDQYLNSLEELTHPWFSPVLYPDLSGLPPAYIATAQYDPLRDVGKLYAEALNKAGVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165872 for 2169 contacts (-76.5/contact) +
2D Compatibility (PS) -26037 + (NN) -16593 + (LL) 4196
1D Compatibility (HY) -14800 + (ID) 4950
Total energy: -224056.0 ( -103.30 by residue)
QMean score : 0.501
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