Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHRLRAAEHPRPDYVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQDLTVAAGGTRGRDGAQGCNLVHVYPDTVVHSVIPLGGGETVGTFVSPGQARRKIAESGIFIEPSRRDSLFKHPPMVLTSSAPRSPVD
2HYO Chain:A ((12-267))
---------PRPDYVLLHISDTHLI----------DADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGAHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATC-------------------GCNLVHVYPDTVVHSVIP-----------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2HYO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201315 for 1909 contacts (-105.5/contact) +
2D Compatibility (PS) -25738 + (NN) -22775 + (LL) 3908
1D Compatibility (HY) -32400 + (ID) 11300
Total energy: -289620.0 ( -151.71 by residue)
QMean score : 0.675
(partial model without unconserved sides chains):
PDB file :
Tito_2HYO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HYO-query.scw
PDB file :
Tito_Scwrl_2HYO.pdb
: