Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRVAVPNKGALSEPATEILAEAGYRRRTDSKDLTVIDPVNNVEFFFLRPKDIAIYVGSGELDFGITGRDLVCDSGAQVRERLA----------LGFGSSSFRYAAPAGRNWTT-ADLAGMRIATAYPNLVRKDLATKGIEATVIRLDGAVEISVQLGVADAIADVVGSGRTLSQHDLVAFGEPLCDSEAVLIERAGTDGQDQTEARDQLVARVQGVVFGQQ--YLMLDYDCPRSALKKATAITPGLESPTIAPLA-DPDWVAIRALVPRRDVNGIMDELAAIGAKAILASDIRFCRF |
| 4YB5 Chain:A ((8-291)) | -LRIAIQKSGRLSKESIELLSECGVKMHIHEQSLIAFSTNLPIDILRVRDDDIPGLIFDGVVDLGIIGENVL-EENELERQSLGENPSYKLLKKLDFGYCRLSLALPQ----QNLKDFEGLRIATSYPQLLKRFMKENGINYKNCTLTGSVEVAPRANLADAICDLVSSGATLQANNLKEV-KVIYESRACLIQKENALSKEKQALVDKIMLRVAGVMQARESKYIML--HAPKEKLDKIQALLPGVERPTILPLAHDEKNVALHMVSKENLFWETMEALKEEGASSIL--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147554 for 1974 contacts (-74.7/contact) +
2D Compatibility (PS) -29001 + (NN) -6645 + (LL) 876
1D Compatibility (HY) -22800 + (ID) 4300
Total energy: -209424.0 ( -106.09 by residue)
QMean score : 0.508
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