Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGAITDQLRRYLHGRRRAAAHMGSDYDGLIADLEDFVL----GGGKRLRPLFAYWGWHAVASR-EPDPDVLLLFSALELLHAWALVHDDLIDRSATRRGRPTAQLRYAALHRDRDWRGSPDQFGMSAAILLGDLAQVWADDIVSKVCQSALAPDAQRRVHRVWADIRNEVLGGQYLDIVAEASAAE------------SIESAMNVATLKTACYTVSRPLQLGTAAAADRSDVAAIFEHFGADLGVAFQLRDDVLGVFGDPAVTGKPSGDDLKSGKRTVLVAEAVELADRSDPLAAKLLRTSIGTRLTDAQVRELRTVIEAVGARAAAESRIAALTQRALATLASAPINATAKAGLSELAMMAANRSA
4GP1 Chain:A ((28-325))----------------------------GLAEDFREAVLYQVKTGGKRLRPLLTLAAAEAVSGQWRP---ALPAAAIVELIHNYSLIYDDIIDRGDVRRGLPTVR----------------KAFGDNAAILVG----IWYREAIEEAVLDTPKPTL---FAKEVAEVIKAIDEGERLDILFEAAGRSDPYFVQARWREVTLDDYIKMVSLKTGA-LIAAAAKWGVLSVSDDRGLAEAAWNFGMAAGVAFQIIDDVLDIYG-------EIGKDIKEHKRGNAVV-AVALSHLGEGERRRLLEILAREVVEEADVREAVALLDSVGAREEALRLAARYREEAERHLAKIPNNGTLK---------------


General information:
TITO was launched using:
RESULT:

Template: 4GP1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139744 for 2259 contacts (-61.9/contact) +
2D Compatibility (PS) -29756 + (NN) -19560 + (LL) 4740
1D Compatibility (HY) -13200 + (ID) 4650
Total energy: -202170.0 ( -89.50 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4GP1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GP1-query.scw
PDB file : Tito_Scwrl_4GP1.pdb: