Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYLDVDGIGQVSRIGLGTWQFGSREWGYGDRYATGAARDIVKRARALGVTLFDTAEIYGLGKSERILGEALGD-DRTEVVVASKV--------FPVAPFPAVIKNRERASARRLQLNRIPLYQIHQPNPVVPDSVIMPGMRDLLDSGDIGAAGVSNYSLARWRKADAALGRPVVSNQVHFSLAHPDALEDLVPFAELENRIVIAYSPLAQGLLGGKYGLENR--PGGVRALNPLFG----TENLRRIEPLLATLRAIAVDVDAKPAQVALAWLISLPGV-VAIPGASSVEQLEFNVAAADIELSAQSRDALTDAARAFRPVSTGRFLTDMVREKVSRR |
1PZ0 Chain:A ((12-301)) | ----------QVFPIGLGTNAVGGHNLYPNLNEETG--KELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDGLVDVL--QGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLAGKYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEKHNVDI----PHIVLAWYLARPEIDILIPGAKRADQLIDNIKTADVTLSQED------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PZ0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140600 for 2243 contacts (-62.7/contact) +
2D Compatibility (PS) -30067 + (NN) -15839 + (LL) 3016
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -205340.0 ( -91.55 by residue)
QMean score : 0.533
|
|
|