Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATIHPPAYLLDQAKRRFTPSFNNFPGMSLVEHMLLNTKFPEKKLAEPPPGSGLKPVVGDAGLPILGHMIEMLRGGPDYLMFLYKTKGPVVFGDSAVLPGVAALGPDAAQVIYSNRNKDYSQQG-WVPVIGPFFHRGLMLLDFEEHMFHRRIMQEAFVRSRL-AGYLEQMDRVVSRVVAD---DWVVNDARFLVYPAMKALTLDIASMVFMGHEPGTD-HELVTKVNKAFTITTRAGNAVIRTSVPPFTWWRGLRARELLENYFTARVKERREASG--NDLLTVLCQTEDDDGNRFSDADIVNHMIFLMMAAHDTSTSTATTMAYQLAAHPEWQQRCR-DESDRHGDG--PLDIESLEQLESLDLVMNESIRLVTPVQWAMRQTVRDTELLGYYLPKGTNVIAYPGMNHRLPEIWTDPLTFDPERFTEPRNEHKRHRYAFTPFGGGVHKCIGMVFDQLEIKTILHRLLRRYRLELSRPDYQPRWDYSAMPIPMDGMPIVLRPR |
| 3JUV Chain:A ((20-439)) | --------------------------------------------------------------IPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTTPVFGKGVAY-DVPNPVF---LEQKKMLKSGLNIAHFKQHVSIIEKETKEYFESWGESGEKN-VFEALSELIILTASHCLHGKEIRSQLNEKVAQLYADLDGGFSHAAWLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQ-DNPASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFDLID-GYFPTVNYTTM-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3JUV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209805 for 3293 contacts (-63.7/contact) +
2D Compatibility (PS) -43700 + (NN) -22398 + (LL) 3476
1D Compatibility (HY) -26400 + (ID) 5500
Total energy: -304327.0 ( -92.42 by residue)
QMean score : 0.406
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