Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRNLFALTPMALALCTASAAWADEGEAKEGFIEGSSLQLLTRNYYFNHDRRHASGHDSKE-WAQGFIATFQSGYTPGVVGFGVDAYGMLGLKLDGGGGTGGTSILPITSPSKEGYESGKAPDEFSSGGAALKIRAFDTELKLGDQFLSNPVVAGGESRMLPQTFRGVSLTNNSFEDLTLTAGQVSFTKYYNQSGHRRLG--SYYGELPGDRDSHHLSWLGGTWGGIEGFTSSLYAAELQNVWKQYYADVDYTYEIDDNWSLNPGA-----HYYKTVDSGDSLLGRIDNNTYSLHFAVGYRQHTVTAVLQKVNGNTPFDYINQGDSIFLDNSQQYSDFNGPNEKSWKLQYDYDFVALGLPGLSASASYSRGKLDLTRVDPDSPGYGGWYSADGKNAKHWERDLDLQYVVQGGPAKDLSLRLRWATHRGTGGYSAVDNDIDEYRVIVDYPIDVF |
| 3T20 Chain:A ((2-391)) | -----------------------------GFLEDSKASLETRNFYMNRDFR------KREEWAQGFILNLQSGYTQGTVGFGLDAMGMLGVKLDS-------------------------PDTYSKLGLTAKVKVSQSELKVGTLIPKLPSVQPNNGRIFPQIFEGALLTSKEIKDLGFTAGRLEKTKI----DSEDLALNDKNGRFAG-VSADHFDLGGLDYKLTDQLTASYHYSNLQDVYRQHFVGLLHS------WPIGPGELTSDLRFARSTDSGSAKAGGIDNKSLNGMFTYSLGNHAFGAAWQRMNGDDAFPYL-EGSNPYLVNFVQVNDFAGPKERSWQLRYDYDFVGLGIPGLTFMTRYVKGD------NVELAGQ-G-------EGREWERNTELQYVFQSGALKNLGIRWRNATFR-----SNFTRDIDENRLIVSYTLPIW |
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General information:
TITO was launched using:
| RESULT:
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Template: 3T20.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8437 for 2731 contacts (3.1/contact) +
2D Compatibility (PS) -37041 + (NN) -9215 + (LL) 2744
1D Compatibility (HY) -25600 + (ID) 7200
Total energy: -67875.0 ( -24.85 by residue)
QMean score : 0.176
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