Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGKPILIVDDSASIRQMLSFTLKSAGYE-VDEAADGKEGLGKAQSKSYSLVFTDQNMPNMDGLSLIRSLRNLAGYRSVPILMLTTESSDAMKQQGRSAGATGWLVKPFDPPKLLEVTRKVLP
3OO1 Chain:A ((8-124))
----FLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTPATLEEKLNKIFE
General information:
TITO was launched using:
RESULT:
Template:
3OO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58407 for 889 contacts (-65.7/contact) +
2D Compatibility (PS) -12480 + (NN) -8280 + (LL) -40
1D Compatibility (HY) -11600 + (ID) 2300
Total energy: -93107.0 ( -104.73 by residue)
QMean score : 0.588
(partial model without unconserved sides chains):
PDB file :
Tito_3OO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OO1-query.scw
PDB file :
Tito_Scwrl_3OO1.pdb
: