Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSMRLKLLRKKLGVTLETLAEKTGLTKSYLSKVERGLNTPSIAAALKLAKALNVQVEELFSEESDGVDGYSIVRRDQRKSLSSGDDGPAYASLAQQIGARALLPFIVHPPRDFSHSTFKEHLGEEFIFVHEGQVEVDFMNQRIILERGDALHFNAQKPHRIRSLGETQAELLVVIHSDE
2B5A Chain:A ((15-70))
----LKKIRTQKGVSQEELADLAGLHRTYISEVERGDRNISLINIHKICAALDIPASTFFRKMEEEN----------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2B5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23256 for 374 contacts (-62.2/contact) +
2D Compatibility (PS) -6260 + (NN) -4786 + (LL) 7340
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -31212.0 ( -83.45 by residue)
QMean score : 0.792
(partial model without unconserved sides chains):
PDB file :
Tito_2B5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B5A-query.scw
PDB file :
Tito_Scwrl_2B5A.pdb
: