Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDAPLRIALIGAGNMGRQHYHRLQRIAGARLCAVADP---QGQAFAADTGV-PWFGDHRRLLEEARPQAAIVANPNNLHVATALDCLAAGVPLLLEKPVGVQLDEVSELVAVARRSGVPLLVGHHRRHNPLVVRARQLIAEGALGRLLSVTAL-----------WQLKKPDSYFEVAWRREPGAGMLLTNLIHDLDLLRHLCG----EVREVQALAGNAIRGLPNEDNIALLLRFANGALGSL----------TGCDAAAAPWSWELAAGENPVYPRQAEQPCYLLAGTEGALSLPQLRRWRYAEARQGWHDPLAASEEAVATGDPLQRQLEHFVRVARGEEAPLMDATDAARTLALVEAVREAARSGRACAPASF |
| 4KOA Chain:A ((2-305)) | ----IRWGLIGASTIAREWVIGAIRAAGGEVVSVMSSSAERGEAYAAENGIAKAVTSVDDLVGDPDVDAVYISTTNELHHGQALAAIRAGKHVLCEKPLAMNLNDGCEMVLKACEAGVVLGTNHHLRNAATHRAMREAIAAGRIGRPIAARVFHAVYLPPHLQGWRLDKP----------EAGGGVILDITVHDADTLRFVLNDDPIEAVAISHSAGMGKEGL--EDGVMGVLRFRSGVIAQFHDAFTTKFAETGLEVHGTAGSL---IGRNVMTQRPV--GTVVLRNEEGESELPLDHRNLYETAIAAFHSAIGGNGRPSASGEDGVWSLATGLAVVKAAATGGAVEIETGL----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -162937 for 2236 contacts (-72.9/contact) +
2D Compatibility (PS) -29468 + (NN) -6707 + (LL) 3532
1D Compatibility (HY) -12000 + (ID) 4250
Total energy: -211830.0 ( -94.74 by residue)
QMean score : 0.408
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