Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGRVAGIVINPAAWTHTSVALRDALAAVE-LPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
2BT4 Chain:A ((10-147))
----IMILNGPNLNLLGQRQPEIYGSDTLADVEALCVKAAAAHGGTVDFRQSNHEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPVVEVHISNIHQREPFRHHSYVSQRADGVVAGCGVQGYVFGVERIAALAG---
General information:
TITO was launched using:
RESULT:
Template:
2BT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -132031 for 1136 contacts (-116.2/contact) +
2D Compatibility (PS) -14965 + (NN) -3127 + (LL) 748
1D Compatibility (HY) -13600 + (ID) 4000
Total energy: -166975.0 ( -146.99 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_2BT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BT4-query.scw
PDB file :
Tito_Scwrl_2BT4.pdb
: