Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSHAFARWNLLLLVASIFAGLVFAPSVDLSALPTPEARKWVLAEVPSVAVDTTVAGKLAGMSWWGRTVDEEREAESKRVSVGVDGVALIKVDWLLRGIVRDEGGIFALVAKSAEGPLRRFAAGATLPGGERLESITEQGIRFSFSQDGNTQGFERKLYAPLP |
1H2T Chain:C ((141-176)) | --------------------------------------------DVPQVRRDWYVYAFLSSLPWVGKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTADKPHPQEEYLDCLWAQIQKLKKDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H2T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3933 for 154 contacts (25.5/contact) +
2D Compatibility (PS) -3493 + (NN) 2164 + (LL) 4104
1D Compatibility (HY) -3200 + (ID) 600
Total energy: 2908.0 ( 18.88 by residue)
QMean score : 0.073
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