Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | METRAHHVLIGLFSVIVIGAALLFGLWLAKSGSEGKFNYYDIVFNEAVSGLSQGSSVQYSGIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPASPMLEGKDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHLDQATGALSAERENVS----AVMQQLAQASRQANAALAQASELMRSANGLLNEQGKGMLENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKTKEFTP |
3G6B Chain:A ((120-237)) | ---------------------------------------------------------------------------------------------------------------------------------------------------EKLIQNIMR-IARETNILALNATIEAARA-GEAGKGFMIVANEVQNLSNETNEVTKQIVEKARE----ILESSQ--RSLENL--EFMANLFETVGKTLQNMVRFMENIVKLLQEVRNSLDTSKESLSE----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 21865 for 529 contacts (41.3/contact) +
2D Compatibility (PS) -12408 + (NN) -7419 + (LL) 12816
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: 6754.0 ( 12.77 by residue)
QMean score : 0.307
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