Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEADYLRLLTRQAEQANDFLSNARKWDRERWVCQRFLEALNVPYRQEDFAAPGEQPPDVLFKGAGFEVFFVLDEGRRLNEEWREELTRRRQAVSLRQLIRREERPQRIAAAELQARLAPTLRKKAHNYSERGIDHGELDLLAFVNLKRAVPDFNTPFPPPTEYLRQGWRSLSMVGPTFARVLFAHSGAPEFLRANLGRSILFDAGVGL |
2WWB Chain:B ((6-44)) | ----QFVEPSRQFVKDSIRLVKRCTKPDRKEFQKIAMATAIGF---------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WWB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 247 for 153 contacts (1.6/contact) +
2D Compatibility (PS) -4168 + (NN) -773 + (LL) 11432
1D Compatibility (HY) -800 + (ID) 200
Total energy: 5738.0 ( 37.50 by residue)
QMean score : 0.337
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