Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKPGAEAWQPTTDLASAGAFLYPARPLNDWDEIMLENTLERLETLVAELLQQNQALRDSHDQLQQQLRQATEENETLQLSMLEQEEKQSGTQARLEALVERLSAQQPVSA
3JB0 Chain:A ((272-334))
-------------LAAIGA-LYP----NEFTENVLD--LSRLSTALLQL--SDTYYQHANDQLRRLYRRMYNDSRTLYMTQRHQE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
3JB0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1256 for 313 contacts (4.0/contact) +
2D Compatibility (PS) -6838 + (NN) -3335 + (LL) 3396
1D Compatibility (HY) -4400 + (ID) 1150
Total energy: -11071.0 ( -35.37 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_3JB0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JB0-query.scw
PDB file :
Tito_Scwrl_3JB0.pdb
: