Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPNFAGTWKMRSSENFDELLKALGVNAMLRKVAVAAASKPHVEIRQDGDQFYIKTSTTVRTTEINFKVGEGFEEETVDGRKCRSLPTWENENKIHCTQTLLEGDGPKTYWTRELAND-ELILTFGADDVVCTRIYVRE
3CBS Chain:A ((1-137))
-PNFSGNWKIIRSENFEELLKVLGVNVMLRKIAVAAASKPAVEIKQEGDTFYIKTSTTVRTTEINFKVGEEFEEQTVDGRPCKSLVKWESENKMVCEQKLLKGEGPKTSWTRELTNDGELILTMTADDVVCTRVYVRE
General information:
TITO was launched using:
RESULT:
Template:
3CBS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44787 for 975 contacts (-45.9/contact) +
2D Compatibility (PS) -15245 + (NN) -7343 + (LL) 208
1D Compatibility (HY) -16400 + (ID) 5250
Total energy: -88817.0 ( -91.09 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_3CBS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CBS-query.scw
PDB file :
Tito_Scwrl_3CBS.pdb
: