Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAGQPGHMPHGGSSNNLCHTLGPVHPPDPQRHPNTLSFRCSLADFQIEKKIGRGQFSEVYKATCLLDRKTVALKKVQIFEMMDAKARQDCVKEIGLLKQLNHPNIIKYLDSFIE--DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSETTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPGEHYSEKLRELVSMCICPDPHQRPDIGYVHQVAKQMHIWMSST |
2XK3 Chain:A ((7-262)) | -------------------------------------------DYEVLYTIGT----RCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS---RDLKPANVFLDGKQNVKLGDFG---------------VGTPYYMSPEQMNR---NEKSDIWSLGCLLYELCALMPPFTA--FSQKELAGKIREGKFRRIP-YRYSDELNEIITRMLNLKDYHRPSV----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124826 for 1616 contacts (-77.2/contact) +
2D Compatibility (PS) -24016 + (NN) -14509 + (LL) 3248
1D Compatibility (HY) -21200 + (ID) 4500
Total energy: -185803.0 ( -114.98 by residue)
QMean score : 0.399
|
|
|