Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKKSCLLL
3BRW Chain:D ((1-167))
MREYKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDAQQCMLEILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINR-----------------
General information:
TITO was launched using:
RESULT:
Template:
3BRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -98859 for 1329 contacts (-74.4/contact) +
2D Compatibility (PS) -17683 + (NN) -3601 + (LL) 1072
1D Compatibility (HY) -24000 + (ID) 8200
Total energy: -151271.0 ( -113.82 by residue)
QMean score : 0.702
(partial model without unconserved sides chains):
PDB file :
Tito_3BRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BRW-query.scw
PDB file :
Tito_Scwrl_3BRW.pdb
: