Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYKLVVVGAGGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQRVEDAFYTLVREIRQYRLKKISKEEKTPGCVKIKKCIIM
4DSN Chain:A ((3-168))
-TEYKLVVVGADGVGKSALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCVFAINNTKSFEDIHHYREQIKRVKDSEDVPMVLVGNKCDLPSRTVDTKQAQDLARSYGIPFIETSAKTRQGVDDAFYTLVREIRKHK----------------------
General information:
TITO was launched using:
RESULT:
Template:
4DSN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99264 for 1364 contacts (-72.8/contact) +
2D Compatibility (PS) -18220 + (NN) -5762 + (LL) 2080
1D Compatibility (HY) -22400 + (ID) 8000
Total energy: -151566.0 ( -111.12 by residue)
QMean score : 0.492
(partial model without unconserved sides chains):
PDB file :
Tito_4DSN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DSN-query.scw
PDB file :
Tito_Scwrl_4DSN.pdb
: