Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRMLLALLALSAARPSASAESHWCYEVQAESSNYPCLVPVKWGGNCQKDRQSPINIVTTKAKVDKKLGRFFFSGYDKKQT--WTVQNNGHSVMMLLENKASISGGGLPAPYQAKQLHLHWSDL-PYKGSEHSLDGEHFAMEMHIVHEKEKGTSRNVKEAQDPEDEIAVLAFLVEAGTQVNEGFQPLVEALSNIPKPEMSTTMAESSLLDLLPKEEKLRHYFRYLGSLTTPTCDEKVVWTVFREPIQLHREQILAFSQKLYYDKEQ-TVSMKDNVRPLQQLGQRTVIKSGAPGRPLPWALPALLGPMLACLLAGFLR |
| 1RJ5 Chain:A ((4-260)) | ---------------------HWTYEGPHGQDHWPTSYP-----ECGGDAQSPINIQTDSVIFDPDLPAVQPHGYDQLGTEPLDLHNNGHTVQLSL--PPTLHLGGLPRKYTAAQLHLHWGQRGSLEGSEHHINSEATAAELHVVHYDSQSYSSLSEAAQKPQG-LAVLGILIEVGETENPAYDHILSRLHEIRYKDQKTSVPPFSVRELFPQ--QLEQFFRYNGSLTTPPCYQSVLWTVFNRRAQISMGQLEKLQETLSSTEEDPSEPLVQNYRVPQPLNQRTIFAS---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RJ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89532 for 2084 contacts (-43.0/contact) +
2D Compatibility (PS) -26836 + (NN) -10784 + (LL) 4108
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -143344.0 ( -68.78 by residue)
QMean score : 0.289
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