Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
1ICJ Chain:A ((1-168))
-SVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEGIGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVPRAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVEKLDRLKARA
General information:
TITO was launched using:
RESULT:
Template:
1ICJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85900 for 1285 contacts (-66.8/contact) +
2D Compatibility (PS) -17657 + (NN) -733 + (LL) 208
1D Compatibility (HY) -24000 + (ID) 8400
Total energy: -136482.0 ( -106.21 by residue)
QMean score : 0.781
(partial model without unconserved sides chains):
PDB file :
Tito_1ICJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ICJ-query.scw
PDB file :
Tito_Scwrl_1ICJ.pdb
: