Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSAIERITKAAHLIDMNDIIREGNPTLRTVAEEVTFPLSDQEIILGEKMMQFLKHSQDPVMAEKMGLRGGVGLAAPQLDISKRIIAVLVPNIVEEGETPQEAYDLEAIMYNPKIVSHSVQDAALGEGEGCLSVDRNVPGYVVRHARVTVDYFDKDGEKHRIKLKGYNSIVVQHEIDHINGIMFYDRINEKDPFAVKDGLLILE
3G6N Chain:A ((5-191))
------------MITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPS--------S----LSTVMYNPKILSHSVQDACLGEGEGCLSVDREVPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE
General information:
TITO was launched using:
RESULT:
Template:
3G6N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96367 for 1394 contacts (-69.1/contact) +
2D Compatibility (PS) -18997 + (NN) -5740 + (LL) 2096
1D Compatibility (HY) -24800 + (ID) 6450
Total energy: -150258.0 ( -107.79 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_3G6N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G6N-query.scw
PDB file :
Tito_Scwrl_3G6N.pdb
: