Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKPMFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQLAHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA
3L92 Chain:A ((4-162))
MITKAIYPGTFDPITNGHLDLVTRASAMFSHVILAIADSSSKKPMFTLDERVALAKKVTAPLKNVEVLGFSELMAEFAKKHNANILVRGLRSVSDFEYEWQLANMNRHLMPKLESVFLIPSEKWSFISSSLVKEVARHGGDITPFLPKPVTKALLAKLA
General information:
TITO was launched using:
RESULT:
Template:
3L92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117072 for 1225 contacts (-95.6/contact) +
2D Compatibility (PS) -17019 + (NN) -8313 + (LL) 0
1D Compatibility (HY) -22800 + (ID) 5850
Total energy: -171054.0 ( -139.64 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_3L92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L92-query.scw
PDB file :
Tito_Scwrl_3L92.pdb
: