Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAASGEQAPCSVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVADAELEPLGEEAAGGDQFIHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYLPQKTASSSHPSA
4KXL Chain:A ((4-144))
----------SVYFCGSIRGGREDQALYARIVSRLRRYGKVLTEHVA---------EAAGGDQFIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEAYL------------
General information:
TITO was launched using:
RESULT:
Template:
4KXL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101062 for 1010 contacts (-100.1/contact) +
2D Compatibility (PS) -14578 + (NN) -9094 + (LL) 1176
1D Compatibility (HY) -19600 + (ID) 6550
Total energy: -149708.0 ( -148.23 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_4KXL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4KXL-query.scw
PDB file :
Tito_Scwrl_4KXL.pdb
: