Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MASPALAAALAVAAAAGPNASGAGERGSGGVANASGASWGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPL-VSLYRQPDGAA---YPQ---CGLNDETWYILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSEKRAPVG--------PDG-----------ASPT---TENGLGAAAGAGENGHCAPPPADVEPDESSAAAERRRRRGALRR------GGRRRAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASSRSVEFFLSRRRRARSSVCRRKVAQA-----REKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFKFFFWIGYCNSSLNPVIYTVFNQDFRRSFKHILFRRRRRGFRQ |
| 3D4S Chain:A ((40-478)) | -------------------------------------------------WVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIWTLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNL--AKSRWYNQTPNRAKRVITTF-RTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVI--QDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLCL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3D4S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182527 for 2928 contacts (-62.3/contact) +
2D Compatibility (PS) -40015 + (NN) 607 + (LL) 2308
1D Compatibility (HY) -34800 + (ID) 6300
Total energy: -260727.0 ( -89.05 by residue)
QMean score : 0.232
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