Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQRQPHSPNQTLISITNDTESSSSVVSNDNTNKGWSGDNSPGIEALCAIYITYAVIISVGILGNAILIKVFFKTKSMQTVPNIFITSLAFGDLLLLLTCVPVDATHYLAEGWLFGRIGCKVLSFIRLTSVGVSVFTLTILSADRYKAVVKPLE----RQPSNAILKTCVKAGCVWIVSMIFALPEAIFSNVYTFRDPNKN--MTFESCTSYPVSKKLLQEIHSLLCFLVF-YIIPLSIISVYYSLIARTLYKSTLNIPTEEQSHARKQIESRKRIARTVLVLVALFALCWLPNHLLYLYHSFTS--QTYVDPSAMHFIFTIFSRVLAFSNSCVNPFALYWLSKSFQKHFKAQLFCCKAERPEPPVADTSLTTLAVMGTVPGTGSIQMSEISVTSFTGCSVKQAEDRF |
| 5C1M Chain:A ((10-296)) | ---------------------------------------GSPSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNV----CNWILSSAIGLP-VMFMATTKYRQGSIDCTLTFSHPTWY--WENLLK-----ICVFIFAFIMPVLIITVCYGLMILRL-KS-----VRMLSGSKEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIA-----LGYTNSCLNPVLYAFLDENFKRCF---------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5C1M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207206 for 2021 contacts (-102.5/contact) +
2D Compatibility (PS) -28493 + (NN) -6109 + (LL) 6284
1D Compatibility (HY) -35600 + (ID) 4800
Total energy: -275924.0 ( -136.53 by residue)
QMean score : 0.336
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