Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTGPDQSYFSGNHWFVFSVYLLTFLVGLPLNLLALVVFVGKLQRR-PVAVDVLLLNLTASDLLLLLFLPFRMVEAANGMHWPLPFILCPLSGFIFFTTIYLTALFLAAVSIERFLSVAHPLWYKTRPRLGQAGLVSVACWLLASAHCSVVYVIEFSGDISHSQGTNGTCYLEFRKDQLAILLPVRLEMAVVL--FVVPLIITSYCYSRLVWILGRGGSHRRQRRVAGLLAATLLNFLVCFGPYNVSHVVGYI---------CGESPAWRIYVTLLSTL---NSCVDPFVYYFSSSGFQADFHELLRRLCGLWGQWQQESSMELKEQKGGEEQRADRPAERKTSEHSQGCGTGGQVACAES |
| 4XT3 Chain:A ((61-314)) | -----------------------------------LVIFTITWRRRIQCSGDVYFINLAAADLLFVCTLPLWMQYLLD--H---ASVPCTLLTACFYVAMFASLCFITEIALDRYYAI---VYMRYRP-VKQACLFSIFWWIFA-----VIIAIPHFMVVTKKDNQCMTDY-----DYLEVSYPIILNVELMLGAFVIPLSVISYCYYRISRIVAVSQS-RHKGRIVRVLIAVVLVFIIFWLPYHLTLFVDTLKLLKWISSSCEFERSLKRALILTESLAFCHCCLNPLLYVFVGTKFRQELHCLLAE----------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188585 for 1652 contacts (-114.2/contact) +
2D Compatibility (PS) -24106 + (NN) -8857 + (LL) 5976
1D Compatibility (HY) -33600 + (ID) 3500
Total energy: -252672.0 ( -152.95 by residue)
QMean score : 0.244
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