Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNVSGCPGAGNASQAGGGGGWHPEAVIVPLLFALIFLVGTVGNTLVLAVLLRGGQAVSTTNLFILNLGVADLCFILCCVPFQATIYTLDGWVFGSLLCKAVHFLIFLTMHASSFTLAAVSLDRYLAIRYPLHSRELRTPRNALAAIGLIWGLSLLFSGPYLSYYRQSQLANLTVCHPAWSAPR---RRAMDICTFVFSYLLPVLVLGLTYARTLRYLWRAVDPVAAGSGAR-RAKRKVTRMILIVAALFCLCWMPHHALILCVWF-----GQFPLTRATYALRILSHLVSYANSCVNPIVYALVSKHFRKGFRTICAGLLGRAPGRASGRVCAAARGTHSGSVLERESSDLLHMSEAAGALRPCPGASQPCILEPCPGPSWQGPKAGDSILTVDVA |
4RWD Chain:A ((122-406)) | ------------------------AIAITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLRLRSVR--LLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVI-VWTLVDIDRRDPLVVAALHLCI---ALGYANSSLNPVLYAFLDENFKRCFRQLC-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RWD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269723 for 2127 contacts (-126.8/contact) +
2D Compatibility (PS) -28599 + (NN) -9510 + (LL) 2568
1D Compatibility (HY) -28000 + (ID) 4650
Total energy: -337914.0 ( -158.87 by residue)
QMean score : 0.359
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